Summer Internship (30 Days)




30-day Summer Training
Available Programmes:
30-day Summer Training
Available Programmes:
- Bioprocess Engineering
- Introduction to genomics & NGS
- Linux environment & bioinformatics tools
- Data quality control (FastQC, Trimmomatic)
- Genome assembly (reference & de novo)
- Genome annotation (BLAST, Prokka)
- Process raw sequencing dataset
- Perform genome assembly + annotation
- Sequence alignment (MUSCLE, local/global)
- Phylogenetic analysis (single gene, core genome)
- ANI, AAI, dDDH heatmaps
- Pathogenomics & AMR analysis
- Pan-genome analysis
- Construct phylogenetic tree
- Identify virulence & resistance genes
- Perform pan-genome analysis
- Amplicon & shotgun metagenomics
- Data filtering & QC
- Diversity analysis (alpha/beta)
- Taxonomic profiling (MetaPhlAn)
- QIIME workflow
- Functional metagenomics
- Analyze microbiome dataset
- Generate diversity plots & taxonomic profiles
- Perform statistical analysis
- Protein modeling & validation
- Ramachandran plot analysis
- Protein docking
- Protein–protein interaction networks
- Cytoscape analysis (hub genes, modules)
- Model and validate protein structure
- Perform docking
- Construct PPI network
- Analytical Science & Environmental Monitoring
Green Nanotechnology & AOP-Mediated Disinfection Internship Program
Phytochemical Synthesis and Advanced Oxidation for Pathogen Control"
This intensive 30-day research program is designed to provide a comprehensive foundation in the green synthesis of nanoparticles and their application in combating multidimensional antibiotic resistance. Participants will transition from plant extraction to evaluating Reactive Oxygen Species (ROS) generation against the clinically critical ESKAPE pathogen panel.
🔹 Phase 1: Foundations & Synthesis (Week 1 – Week 2)
Module 1 : The AMR Landscape & AOP Principles: Understanding ESKAPE pathogen profiles and the theory of ROS generation via nanoparticles. Module 2 : Botanical Extraction: Collection and authentication of Azadirachta indica (Neem) or Ocimum sanctum (Tulsi) for aqueous leaf extract preparation. Module 3: Nanoparticle Synthesis: Green synthesis of AgNPs and ZnO-NPs using metal precursors and plant extracts. Module 4: Optimization & Characterization: Utilizing UV-Vis (Cary 60) to monitor SPR peaks (~420 nm for AgNPs) and varying pH/temperature for optimal yield.🔹 Phase 2: Antimicrobial Dynamics & Data Analysis ( Week 3 – Week 6)
Module 5 : Phenotypic Susceptibility: Executing Well Diffusion Assays (WDA) and determining Minimum Inhibitory Concentration (MIC) via broth microdilution. Module 6 : Photocatalytic AOP Study: Investigating microbial disinfection under UV-A light (365 nm) to trigger membrane and DNA damage. Module 7: Scientific Reporting: Statistical analysis (ANOVA/t-tests) and drafting dissertation-ready figures and discussion sections.Advanced Bioinformatics
“From Omics Data to Publication: A Complete Research Journey”
Developed from the Advanced Bioinformatics Workshop Series, this internship provides a project-driven, end-to-end research experience covering Genomics → Comparative Genomics → Metagenomics → Proteomics, culminating in a publishable manuscript.
🔹 Phase 1: Foundation Training (Days 1–05)
Learning Modules
Practical Outcome
🔹 Phase 2: Comparative Genomics & Evolution (Days 6–11)
Learning Modules
Practical Outcome
🔹 Phase 3: Metagenomics Analysis (Days 11–20)
Learning Modules
Practical Outcome
🔹 Phase 4: Proteomics & Systems Biology (Days 20–30)
Learning Modules
Practical Outcome
🔹 Phase 5: Project Development & Publication (Days 15–30)
Project Work
Participants will choose one integrated project:
Contact for More Details
Green Nanotechnology & AOP-Mediated Disinfection Internship Program
Phytochemical Synthesis and Advanced Oxidation for Pathogen Control"
This intensive 30-day research program is designed to provide a comprehensive foundation in the green synthesis of nanoparticles and their application in combating multidimensional antibiotic resistance. Participants will transition from plant extraction to evaluating Reactive Oxygen Species (ROS) generation against the clinically critical ESKAPE pathogen panel.
🔹 Phase 1: Foundations & Synthesis (Week 1 – Week 2)
Module 1 : The AMR Landscape & AOP Principles: Understanding ESKAPE pathogen profiles and the theory of ROS generation via nanoparticles.
Module 2 : Botanical Extraction: Collection and authentication of Azadirachta indica (Neem) or Ocimum sanctum (Tulsi) for aqueous leaf extract preparation.
Module 3: Nanoparticle Synthesis: Green synthesis of AgNPs and ZnO-NPs using metal precursors and plant extracts.
Module 4: Optimization & Characterization: Utilizing UV-Vis (Cary 60) to monitor SPR peaks (~420 nm for AgNPs) and varying pH/temperature for optimal yield.
🔹 Phase 2: Antimicrobial Dynamics & Data Analysis ( Week 3 – Week 6)
Module 5 : Phenotypic Susceptibility: Executing Well Diffusion Assays (WDA) and determining Minimum Inhibitory Concentration (MIC) via broth microdilution.
Module 6 : Photocatalytic AOP Study: Investigating microbial disinfection under UV-A light (365 nm) to trigger membrane and DNA damage.
Module 7: Scientific Reporting: Statistical analysis (ANOVA/t-tests) and drafting dissertation-ready figures and discussion sections.
Advanced Bioinformatics
“From Omics Data to Publication: A Complete Research Journey”
Developed from the Advanced Bioinformatics Workshop Series, this internship provides a project-driven, end-to-end research experience covering Genomics → Comparative Genomics → Metagenomics → Proteomics, culminating in a publishable manuscript.
🔹 Phase 1: Foundation Training (Days 1–05)
Learning Modules
- Introduction to genomics & NGS
- Linux environment & bioinformatics tools
- Data quality control (FastQC, Trimmomatic)
- Genome assembly (reference & de novo)
- Genome annotation (BLAST, Prokka)
Practical Outcome
- Process raw sequencing dataset
- Perform genome assembly + annotation
🔹 Phase 2: Comparative Genomics & Evolution (Days 6–11)
Learning Modules
- Sequence alignment (MUSCLE, local/global)
- Phylogenetic analysis (single gene, core genome)
- ANI, AAI, dDDH heatmaps
- Pathogenomics & AMR analysis
- Pan-genome analysis
Practical Outcome
- Construct phylogenetic tree
- Identify virulence & resistance genes
- Perform pan-genome analysis
🔹 Phase 3: Metagenomics Analysis (Days 11–20)
Learning Modules
- Amplicon & shotgun metagenomics
- Data filtering & QC
- Diversity analysis (alpha/beta)
- Taxonomic profiling (MetaPhlAn)
- QIIME workflow
- Functional metagenomics
Practical Outcome
- Analyze microbiome dataset
- Generate diversity plots & taxonomic profiles
- Perform statistical analysis
🔹 Phase 4: Proteomics & Systems Biology (Days 20–30)
Learning Modules
- Protein modeling & validation
- Ramachandran plot analysis
- Protein docking
- Protein–protein interaction networks
- Cytoscape analysis (hub genes, modules)
Practical Outcome
- Model and validate protein structure
- Perform docking
- Construct PPI network
🔹 Phase 5: Project Development & Publication (Days 15–30)
Project Work
Participants will choose one integrated project:
